Commit graph

6 commits

Author SHA1 Message Date
Ramprasad Neethiraj
26311aba2a fix minor errors 2022-05-03 15:04:37 +02:00
Ramprasad Neethiraj
2990dc8357 callcnv module 2022-05-03 14:20:05 +02:00
Ramprasad Neethiraj
d2004a2b76 update cnvpytor 2022-05-01 21:14:01 +02:00
Ramprasad Neethiraj
67c1bc9568
Add stubs to cnvpytor module (#1473)
* callcnvs stub and tests

* partition stub and test

* histogram stub and test

* importreaddepth stub and tests

* update module scripts

Co-authored-by: Sima Rahimi <sima.rahimi@gu.se>
2022-04-01 17:35:15 +02:00
Ramprasad Neethiraj
233f2e728b
fix cnvpytor links (#1470) 2022-03-31 10:53:26 +02:00
Sima Rahimi
86ac223916
Cnvpytor (#1297)
* Added cnvpytor/importreaddepth module

* Corrected process name in meta.yml file

* added -chrom argument

* space correction

* Added complementary info

* fixed typo

* md5sum added

* modified the module to work on cram files as well

* Added cnvpytor/histogram module and test files

* Added cnvpytor/partition module and test files

* added cnvpytor/callcnvs module and tests

* modified by new modules

* Added test file and fixed input path in modules

* added when block

* little fixes

* skip tracking test.yml

* removed changes to test if conflicts get resolved

* updated outfile name

* corrected the version.yml content
2022-03-15 10:20:46 +01:00