6 commits

Author	SHA1	Message	Date
Patrick Hüther	8a44258548	remove params section from meta.yml (#282)	2021-03-19 13:16:50 +01:00
Jose Espinosa-Carrasco	572abb00b3	Remove def from module options definition in main (#270) ... * Remove def from module options definition in main * Fix bismark_deduplicate tests * Fix bwameth_align tests * Fixing gatk4 conda tests ("=" instead of ':' in build id) * Same as previous commit (Fix gatk4 test) * Fix qualimap bamqc test (no md5 check for pngs) * Fix seqkit split2 tests. Changed to new test data * Fix samtools tests. Some were missing initOptions include * Removing TOOL SUBTOOL template module since now it is included on tools repo	2021-03-15 12:16:43 +00:00
JoseEspinosa	823a631afc	Fix tools entry on yml	2021-02-24 09:47:36 +01:00
JoseEspinosa	af7bc743bf	Correct yml file, add fasta to input and correct vcf on output	2021-02-24 09:15:18 +01:00
JoseEspinosa	138be9f918	Adding label to the bcftools-mpileup process	2021-02-23 21:52:15 +01:00
JoseEspinosa	035443b6e0	Add bcftools-mpileup module	2021-02-23 19:05:26 +01:00