5 commits

Author	SHA1	Message	Date
James A. Fellows Yates	90aef30f43	Set process label to process_single for modules with no task.cpus usage (#2076) ... * Set process label to `process_single` for modules with no `task.cpus` usage * Fix tests of 'borked' modules * prettier * More modules are single-threaded and can use process_single * Adding process_single to hmmer/esl* modules * Fix failing tests * Prettier Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk> Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>	2022-09-19 11:54:47 +02:00
Jasmin F	e55012ff92	DeepBGC: tiny revisiosn (#2070) ... * Fix variable prodigal_tf * Remove tag in main.nf + tiny suggestions in ymls Co-authored-by: louperelo <44900284+louperelo@users.noreply.github.com>	2022-09-15 22:57:33 +02:00
louperelo	d7d6b8222e	Deepbgc update versions.yml (#2058) ... * not working yet (db not found) * modify deeparg/download module to return db-path * 🪄 * Prettier * add test.yml * much prettier * test.yml delete md5 for pot. empty files * adapt test.yml * test.yml again * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * add deepbgc prodigal version to versions.yml * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-09-14 16:15:00 +02:00
louperelo	eae945721d	new module: deepbgc/pipeline (#2014) ... * not working yet (db not found) * modify deeparg/download module to return db-path * 🪄 * Prettier * add test.yml * much prettier * test.yml delete md5 for pot. empty files * adapt test.yml * test.yml again * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-09-07 14:59:01 +02:00
louperelo	04dfb65335	Deepbgcdownload (#2010) ... * deepbgc_download first version * with test.yml * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Apply suggestions from code review * delete trailing whitespace main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-09-05 16:51:21 +02:00