Matthias Hörtenhuber
|
e745e167c1
|
Fix formatting in yaml files, add yamllint config (#1279)
* fix yml formatting
* allow fastq.gz and fq.gz as file input, add meta.yml and test
* fix yaml files
* Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test"
This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4.
* prettier magic!
* fix comments for yamllint
* remove node version number
* fix linting errors
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2022-02-15 11:15:27 +00:00 |
|
Harshil Patel
|
49da864287
|
Update versions key in meta.yml for all modules (#787)
|
2021-10-03 08:20:26 +01:00 |
|
Gregor Sturm
|
906577873b
|
Bulk update modules to use versions.yml (#739)
* New functions.nf
* Convert code to create versions.yml
* Update meta.yml
* update output channel
* Fix more meta.yml
* Manually update remaining modules
* remove superflous echo
* Fix misformatted meta.yml files
* Fix yaml, was list instead of dict
* fix version for bcftools
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2021-09-27 09:41:24 +01:00 |
|
Abhinav Sharma
|
0d53a34eed
|
module fastani (#695)
* initiate agrvate module
* remove todos [ci skip]
* initiate fastani draft [ci skip]
* clean stubs [ci skip]
* interim commit [ci skip]
* accomodate the batch/per-sample processing [ci skip]
* use the meta map [ci skip]
* run first test [ci skip]
* remove extra spaces [ci skip]
* change output file name [ci skip]
* update the expected output [ci skip]
* update the files used for test [ci skip]
* fix typo [ci skip]
* test passing [ci skip]
* update the description
* remove extra files
* accomodate CR suggestions [ci skip]
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* accomodate CR suggestions [ci skip]
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* accomodate CR suggestions [ci skip]
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* use meta map for batch analysis
* fix the tests
* rely upon tuples
* Apply suggestions from code review
* Update main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2021-09-21 20:20:26 +01:00 |
|