Commit graph

3 commits

Author SHA1 Message Date
Matthias De Smet
b59713e623
Tool/snap aligner single (#1510)
* first commit

* add tool

* fix tests

* fix indents

* Update modules/snapaligner/single/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* fix comments

* fix versions

* prettier

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-04-12 11:20:35 +02:00
Matthias De Smet
09125979cc
Tool/snap aligner paired (#1509)
* first commit

* edit main.nf

* edit tests

* run prettier

* fix test

* indent script

* Update modules/snapaligner/paired/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/snapaligner/paired/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* fix version nr

* update meta

* fix versions

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-04-12 11:02:10 +02:00
Matthias De Smet
f57f085912
new tool snap-aligner/index (#1506)
* add snapaligner/index

* output fixes

* fix outputs

* fix tests

* update inputs

* fix more bugs

* fix linting

* Update modules/snapaligner/index/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/snapaligner/index/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* fix comments

* fix indents

* fix escaping

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-04-08 14:41:08 +02:00