Commit graph

6 commits

Author SHA1 Message Date
James A. Fellows Yates
90aef30f43
Set process label to process_single for modules with no task.cpus usage (#2076)
* Set process label to `process_single` for modules with no `task.cpus` usage

* Fix tests of 'borked' modules

* prettier

* More modules are single-threaded and can use process_single

* Adding process_single to hmmer/esl* modules

* Fix failing tests

* Prettier

Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk>
Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>
2022-09-19 11:54:47 +02:00
Sofia Stamouli
734d0db607
Update module: Use report insted of results for centrifuge/kreport (#1929)
* Use report insted of results for kreport

* Update modules/centrifuge/kreport/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-07-27 14:24:06 +02:00
Sofia Stamouli
be4ae28c3c
Add centrifuge_kreport module (#1514) 2022-04-13 15:33:51 +02:00
Sofia Stamouli
d2726fcf75
Update centrifuge/centrifuge (#1495) 2022-04-07 11:46:34 +02:00
Sofia Stamouli
6a11c5a222
Fix untar for centrifuge (#1472) 2022-04-04 10:18:11 +02:00
Sofia Stamouli
ea41a8a6f7
Add centrifuge module (#1410)
* Add centrifuge module

* Add centrifuge module

* Add centrifuge module

* Add centrifuge module
2022-03-18 15:39:27 +01:00