Commit graph

20 commits

Author SHA1 Message Date
nvnieuwk
1a4ab76618
new module rtgtools/pedfilter (#1777)
* new module rtgtools/pedfilter

* removed checksum due to the presence of a date in the file
2022-06-14 16:02:18 +02:00
Nicolas Vannieuwkerke
6fa1c8089a Added memory allocation to VCFeval 2022-05-13 10:03:20 +02:00
Nicolas Vannieuwkerke
fa7c947c35 Adjusted meta 2022-05-10 13:33:37 +02:00
Nicolas Vannieuwkerke
b7134855e4 Small update on the output channels 2022-05-10 12:34:52 +02:00
Nicolas Vannieuwkerke
c18391aa49 Updated meta.yml 2022-05-10 12:26:13 +02:00
nvnieuwk
2eb77bd64e
Update modules/rtgtools/vcfeval/main.nf
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-05-10 12:22:56 +02:00
nvnieuwk
29f2d3c284
Update modules/rtgtools/vcfeval/main.nf
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-05-10 12:22:49 +02:00
Nicolas Vannieuwkerke
ef4857ec54 Updated meta.yml 2022-05-10 12:20:01 +02:00
Nicolas Vannieuwkerke
f3d5584ab0 Linting 2022-05-10 12:08:23 +02:00
Nicolas Vannieuwkerke
5db26f9f35 Linting 2022-05-10 12:07:11 +02:00
Nicolas Vannieuwkerke
3a064b0a99 Split the output to different channels 2022-05-10 12:05:42 +02:00
Nicolas Vannieuwkerke
c69d5cc23e Added evaluation-regions and adjusted the output to now contain all output (and not only the summary) 2022-05-10 09:35:42 +02:00
Nicolas Vannieuwkerke
bd7e1414a4 Fixed meta.yml 2022-05-09 15:55:48 +02:00
Nicolas Vannieuwkerke
1b63d03f8e adjusted the bed variable name 2022-05-09 15:51:19 +02:00
Nicolas Vannieuwkerke
f6262b4a10 fixed some issues 2022-05-09 15:47:07 +02:00
Nicolas Vannieuwkerke
d18af7358a Moved untarring the genome sdf folder to the test itself 2022-05-09 09:20:42 +02:00
nvnieuwk
6fd9246aef
Update modules/rtgtools/vcfeval/main.nf
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-05-09 08:07:33 +02:00
Nicolas Vannieuwkerke
e271410017 Removed some whitespaces 2022-05-06 16:21:32 +02:00
Nicolas Vannieuwkerke
84b354ab6a Added the rtgtools/vcfeval module 2022-05-06 14:23:40 +02:00
Nicolas Vannieuwkerke
3c07602443 Added the version.yml 2022-05-04 16:51:09 +02:00