4 commits

Author	SHA1	Message	Date
James A. Fellows Yates	90aef30f43	Set process label to process_single for modules with no task.cpus usage (#2076) ... * Set process label to `process_single` for modules with no `task.cpus` usage * Fix tests of 'borked' modules * prettier * More modules are single-threaded and can use process_single * Adding process_single to hmmer/esl* modules * Fix failing tests * Prettier Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk> Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>	2022-09-19 11:54:47 +02:00
Matthieu Muffato	c736d26b7e	bedToBigBed AutoSql option (#1981) ... * Added missing "ucsc" tags (as per the convention) * Added support for the -as input file * Added a test	2022-09-09 09:27:47 +01:00
Matthieu Muffato	11cf45043c	Newer container version because the previous one is misconfigured (#1961) ... The previous one raises the warning > WARNING: Skipping mount /path/to/singularity-v3.9.0/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>	2022-08-22 21:01:13 +01:00
Matthieu Muffato	458f4396a6	Added support for task.ext.args (#1954) ... * Added support for `task.ext.args` * Renamed the module since it can now process any sort of BED file	2022-08-16 12:05:25 +01:00