Jose Espinosa-Carrasco
13bd67ed8a
Fix some module test after adapting test config approach ( #379 )
...
* Fix paths for bowtie2/build_test
* Fix paths for bowtie2/align
* Fix paths for bwameth/index
* Fix paths for bwameth/align
* Fix paths for multiqc tests
2021-03-24 18:29:41 +00:00
Harshil Patel
acb1a12a56
Re-organise all test data ( #354 )
...
* Re-organise all test data
* Fix ECLint
* Fix ECLint agaaainn
* Now is not the time EClint
2021-03-24 09:53:41 +00:00
Jose Espinosa-Carrasco
ee90e7af77
Add default output dir for modules that create indices, updated ( #336 )
...
* Add default output dir for modules that create indices
* Change path for index module test output
* Fix bowtie2/align tests
* Fixing bowtie/align tests
* Fix genomegenerate test
* Fixing README linting
2021-03-23 17:55:01 +00:00
Jose Espinosa-Carrasco
74ff11b07b
Fix bowtie builds ( #273 )
...
* Fix bowtie build test
* Forgot to delete old bowtie_build
* Fix bowtie2 build tests
* Add initOptions include on hisat2 extractsplicesites
2021-03-15 15:39:42 +01:00
