Matthias Hörtenhuber
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e745e167c1
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Fix formatting in yaml files, add yamllint config (#1279)
* fix yml formatting
* allow fastq.gz and fq.gz as file input, add meta.yml and test
* fix yaml files
* Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test"
This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4.
* prettier magic!
* fix comments for yamllint
* remove node version number
* fix linting errors
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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2022-02-15 11:15:27 +00:00 |
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Annick Renevey
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45985ff6f0
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Peddy nf core2 2dev0 (#1048)
* Updated module to fit nf-core2.2dev0 templates
* Updated module to fit nf-core2.2dev0 templates
* Linked test files to nf-core/test-dataset branch:raredisease raw files
* Change order of input: vcf and tbi with meta, ped without
* Change order of input: vcf and tbi with meta, ped without/adapt test
* Change order of input: vcf and tbi with meta, ped without/adapt test, bugfix
* Indent and rename files
* Update modules/peddy/main.nf
Removed newline
Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
* Update modules/peddy/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update modules/peddy/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update modules/peddy/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update modules/peddy/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update modules/peddy/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update modules/peddy/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update modules/peddy/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update pytest_modules.yml
* Update main.nf
* Apply suggestions from code review
Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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2021-11-21 20:14:09 +00:00 |
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