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3 commits

Author SHA1 Message Date
Edmund Miller
a3684d9594
Lint modules ci (#389) 
* ci: Add modules lint step

Moved it ahead of the nextflow install so ideally it'll fail before we
bother doing any more setup

* ci: _ => /

* Update tests/config/pytest_software.yml

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
 2021-04-08 09:10:52 +01:00
Kevin Menden
6973df628f
Fixing vcftools and bismark tests (#383) 
* fixed vcftools

* fixed genomepreparation, methylationextractor

* fixed deduplicate
 2021-03-25 09:12:08 +00:00
Patrick Hüther
7fe6f9fab2
bismark: remove underscores from process names (#303) 
* sanitize process names

no underscores allowed

* remove underscores from process names
 2021-03-22 17:46:11 +01:00
Renamed from tests/software/bismark/genome_preparation/test.yml (Browse further)