arontommi
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d162f21ab3
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Update samtools modules with config logic (#381)
* fixing paths for test
* fixing paths for test
* fixing pats to tests
* fixing paths to tests
* fixing paths to tests
* fixing paths for tests
* fixing paths for tests
* fixing paths for tests
* fixing paths fro tests
* fixing paths for tests
* indentation fixes
* typo
* renaming test results according to new file name
* replacing the md5sums
* fixing brackets
* replacing md5sums
* fixing md5sums
* fixing md5sums'
* Update test.yml
* Update test.yml
* Update test.yml
* Update test.yml
* Update test.yml
* Update test.yml
* Update test.yml
* Update test.yml
Co-authored-by: Ramon Rivera <ramon.rivera10@upr.edu>
Co-authored-by: Ramon Rivera <riveravicens@gmail.com>
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2021-03-24 18:15:30 +00:00 |
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suzannejin
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d6850f8312
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modified the samtools/fastq module (#339)
* new module: samtools/fastq
* solve conflict: pytest_software.yml
* solve linting conflicts
* solved EditorConfig linting problem
* Module samtools/fastq:
* output compressed fastq.gz file(s)
* add if conditionals for single/paired reads
* samtools/fastq: modified test.yml
* samtools/fastq: modified main.nf to avoid duplicated part of the script section
Co-authored-by: suzannejin <suzanne.jin@crg.eu>
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2021-03-23 17:43:52 +00:00 |
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suzannejin
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9115c12f88
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new module: samtools/fastq (#316)
* new module: samtools/fastq
* solve conflict: pytest_software.yml
* solve linting conflicts
* solved EditorConfig linting problem
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2021-03-23 12:13:07 +01:00 |
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