Matthias Hörtenhuber
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e745e167c1
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Fix formatting in yaml files, add yamllint config (#1279)
* fix yml formatting
* allow fastq.gz and fq.gz as file input, add meta.yml and test
* fix yaml files
* Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test"
This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4.
* prettier magic!
* fix comments for yamllint
* remove node version number
* fix linting errors
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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2022-02-15 11:15:27 +00:00 |
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Harshil Patel
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49da864287
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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Gregor Sturm
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906577873b
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Bulk update modules to use versions.yml (#739)
* New functions.nf
* Convert code to create versions.yml
* Update meta.yml
* update output channel
* Fix more meta.yml
* Manually update remaining modules
* remove superflous echo
* Fix misformatted meta.yml files
* Fix yaml, was list instead of dict
* fix version for bcftools
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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2021-09-27 09:41:24 +01:00 |
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James A. Fellows Yates
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6913da9d2d
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module: MALT/BUILD (#645)
* Specify more guidelines on input channels
* Linting
* Updates based on code review
* Update README.md
* Fix broken sentence
* Start MALT-build
* Start MALT build (missing meta files and outputs specS)
* Local tests
* Correct test map_type
* Finished module, just waiting for UNZIP module to finalise tests
* Correct tests in preparation for Unzip
* Ouptut log file too
* Update meta.yml
* Rename log file
* Rename log file
* Remove debugging stuff
* Add Unzip module
* Linting update
* Linting update
* Fix input db
* Fix db file in cmd
* Update modules/malt/build/main.nf
* Update modules/malt/build/main.nf
* Update main.nf
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2021-08-03 16:24:19 +02:00 |
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