3 commits

Author	SHA1	Message	Date
JIANHONG OU	c8f2c44e22	Merge remote-tracking branch 'origin' into motus_profile	2022-05-05 09:41:13 -04:00
Jasmin F	61e740f79c	Add antismash download DB: missing container folders as output channels (#1567) ... * Add missing container folders as output channels * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tool name * Update test output checksum Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-27 12:40:04 +02:00
Jasmin F	d07d270743	Antismashlite download databases (#1426) ... * Create module antismashlitedownloaddatabases * Corrected user-specification of database directory * Updated test.yml * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Fix typo in test.yml * Feed database files via docker/singularity mount) * Add external db file mounts to the containers * Fixed docker command in main.nf * Apply prettier * Apply prettier and add PWD * Add more output to test.yml * Add more output paths to test.yml * Fixed test.yml * Apply suggestions from code review Add documentation of why we need to mount files to the containers. Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Fix code linting errors (remove trailing whitespaces) * Fix code linting error (remove trailing whitespace) * Fix errors from Prettier linting Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-21 10:38:17 +02:00