nf-core_modules

1763 commits 30 branches 0 tags 142 MiB

Author	SHA1	Message	Date
Matthias Hörtenhuber	e745e167c1	Fix formatting in yaml files, add yamllint config (#1279 ) * fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>	2022-02-15 11:15:27 +00:00
Gregor Sturm	3d0b873584	Run CI only on pull-requests and on the master-branch. (#743 ) * Run CI only on pull-requests and on the master-branch. * also for the other workflows	2021-09-27 08:03:30 +02:00
Harshil Patel	f34892c1af	Test PR for nf-core modules lint (#414 ) * Update functions.nf for publish_by_id * Pass a list of publish_by_id instead of a string * Remove NF version * Rename code linting file * Run separate workflow for nf-core modules lint * Adjust nf-core update comment * Comment out linting from pytest-workflow.yml * Remove commented out linting code from pytest-workflow.yml * Adjust spacing * Adjust spacing again * Move NF version to job level for linting * Add CAPSULE_LOG none env when installing NF * Remove NXF_ANSI_LOG env for linting * Revert changes	2021-04-09 07:58:43 +01:00

Author

SHA1

Message

Date

Matthias Hörtenhuber

e745e167c1

Fix formatting in yaml files, add yamllint config (#1279 )

* fix yml formatting

* allow fastq.gz and fq.gz as file input, add meta.yml and test

* fix yaml files

* Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test"

This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4.

* prettier magic!

* fix comments for yamllint

* remove node version number

* fix linting errors

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

2022-02-15 11:15:27 +00:00

Gregor Sturm

3d0b873584

Run CI only on pull-requests and on the master-branch. (#743 )

* Run CI only on pull-requests and on the master-branch.

* also for the other workflows

2021-09-27 08:03:30 +02:00

Harshil Patel

f34892c1af

Test PR for nf-core modules lint (#414 )

* Update functions.nf for publish_by_id

* Pass a list of publish_by_id instead of a string

* Remove NF version

* Rename code linting file

* Run separate workflow for nf-core modules lint

* Adjust nf-core update comment

* Comment out linting from pytest-workflow.yml

* Remove commented out linting code from pytest-workflow.yml

* Adjust spacing

* Adjust spacing again

* Move NF version to job level for linting

* Add CAPSULE_LOG none env when installing NF

* Remove NXF_ANSI_LOG env for linting

* Revert changes

2021-04-09 07:58:43 +01:00

Renamed from .github/workflows/linting.yml (Browse further)

3 commits