4 commits

Author	SHA1	Message	Date
Jose Espinosa-Carrasco	95e02f913f	Update comments with new style (#497) ... * Update comment style on functions.nf files * Update test main.nf comments * Add meta for ggread	2021-05-12 14:56:46 +01:00
Harshil Patel	dce27b8102	Update functions.nf to be more flexible for publishing by meta keys (#423) ... * Update functions.nf * Replace saveAs line in module main script * Add spacing for ECLint	2021-04-09 17:23:56 +01:00
Patrick Hüther	6c70d65ae6	bismark/report: allow missing input data (#400) ... * bismark/report: allow missing data * bismark/summary: improve matching of process output	2021-04-06 10:59:00 +01:00
Patrick Hüther	f9ce8664ba	add bismark/report (#297) ... * add bismark/align module * bismark/align: add tests * bismark/align: update meta.yml * bismark/align: skip checksum for alignment logs they contain timestamps * bismark/align: restore correct checksum caused some mixup in the last commit * bismark/align: add genome_preparation to filters * Fix conda version pin * change options to be a global var * remove params from meta.yml * add bismark/report * fix test filepaths * remove mysterious index files	2021-03-22 13:38:08 +01:00