millironx/nf-core_modules
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4 commits

Author SHA1 Message Date
Maxime U. Garcia
e786457fb0
feat: add readgroup info + reorder samtools command line to mimic bwamem (#1447) 2022-03-25 11:26:47 +01:00
Mahesh Binzer-Panchal
e20e57f90b
Add when: block (#1261) 2022-02-04 09:53:32 +01:00
Maxime U. Garcia
ca3ae9ff4f
feat: update dragmap to follow new bwa/mem + bwamem2/mem logic (#1146) 2021-12-08 23:19:37 +01:00
Edmund Miller
f3ffa69b8d
Dragmap (#1108) 
* feat(dragmap): Add initial hastable module

* feat(dragmap): Add initial align module

* test(dragmap): Remove md5sum

Forgot sam files have a header. Might pipe this through samtools.

* build(dragmap): Add mulled container

* chore(dragmap): Update prefix

* feat(dragmap): Output a bam file

* feat(dragmap): Add log files

* Update modules/dragmap/align/meta.yml

Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>
 2021-12-06 09:56:41 +01:00