Ramprasad Neethiraj
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e639b1e455
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Merge branch 'master' into feat/update_cnvpytor
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2022-05-06 12:03:12 +02:00 |
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Ramprasad Neethiraj
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77209d0866
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Merge pull request #1618 from ramprasadn/feat/update_svdb
update svdb version
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2022-05-06 11:48:22 +02:00 |
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Matthias De Smet
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bd1b80f36e
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fix software definitions
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2022-05-06 11:07:05 +02:00 |
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Ramprasad Neethiraj
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1ccea5ff4d
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remove prefix def in callcnvs
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2022-05-06 10:56:58 +02:00 |
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Matthias De Smet
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1c7205d683
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fixed container definitions
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2022-05-06 10:44:51 +02:00 |
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Matthias De Smet
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77d825e043
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fix copy paste errors
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2022-05-06 10:39:13 +02:00 |
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Matthias De Smet
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09e729ad41
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added sha256sum
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2022-05-06 10:28:14 +02:00 |
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Matthias De Smet
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853b623969
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new module: md5sum
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2022-05-06 09:20:40 +02:00 |
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Ramprasad Neethiraj
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313d76e005
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update svdb version
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2022-05-06 00:18:16 +02:00 |
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Ramprasad Neethiraj
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bb5c904e59
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Merge branch 'feat/update_cnvpytor' of github.com:ramprasadn/modules into feat/update_cnvpytor
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2022-05-06 00:13:57 +02:00 |
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Ramprasad Neethiraj
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af73544010
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update meta
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2022-05-06 00:13:49 +02:00 |
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Ramprasad Neethiraj
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db56d80060
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Merge branch 'master' of https://github.com/nf-core/modules into feat/update_cnvpytor
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2022-05-06 00:10:28 +02:00 |
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Ramprasad Neethiraj
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1a3f18d012
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Merge branch 'master' into feat/update_cnvpytor
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2022-05-06 00:10:05 +02:00 |
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Ramprasad Neethiraj
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e4e4f8090c
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combine multiple pytor
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2022-05-05 23:59:12 +02:00 |
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Sateesh Peri
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faf45edc5e
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Merge branch 'master' into busco
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2022-05-05 12:48:39 -04:00 |
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Ramprasad Neethiraj
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4dff258262
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Merge pull request #1594 from ramprasadn/feat/update_cnvpytor
update cnvpytor to v1.2.1
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2022-05-05 17:32:00 +02:00 |
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Ramprasad Neethiraj
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db2acba71b
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Merge branch 'master' into feat/update_cnvpytor
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2022-05-05 17:31:10 +02:00 |
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Ramprasad Neethiraj
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c183d7b397
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Merge branch 'feat/update_cnvpytor' of github.com:ramprasadn/modules into feat/update_cnvpytor
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2022-05-05 17:28:59 +02:00 |
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Ramprasad Neethiraj
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ea1f5daf44
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polish python script in view
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2022-05-05 17:28:49 +02:00 |
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Harshil Patel
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1289626cc9
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Update modules/busco/main.nf
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2022-05-05 16:09:45 +01:00 |
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Mahesh Binzer-Panchal
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2542ae1823
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Update modules/busco/main.nf
Co-authored-by: Sateesh Peri <33637490+sateeshperi@users.noreply.github.com>
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2022-05-05 16:33:32 +02:00 |
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Sateesh Peri
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3414d3aba3
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Merge branch 'master' into busco
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2022-05-05 10:08:55 -04:00 |
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JIANHONG OU
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1be14375ce
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Merge pull request #1528 from jianhong/motus_downloaddb
add module motus_downloaddb
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2022-05-05 09:37:02 -04:00 |
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JIANHONG OU
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a8bc386ea3
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Merge branch 'master' into motus_downloaddb
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2022-05-05 09:36:25 -04:00 |
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Simone Carpanzano
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e4a31e4e0e
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Merge pull request #1601 from carpanz/firstbranch
Non-breaking changes to krona modules: update kronadb module name, inclusion of ext.args, legacy module maintained
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2022-05-05 14:32:54 +02:00 |
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JIANHONG OU
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566c11dacc
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Merge branch 'master' into motus_downloaddb
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2022-05-05 08:28:10 -04:00 |
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Francesco L
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97f318eea6
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Merge branch 'master' into firstbranch
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2022-05-05 14:25:00 +02:00 |
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Maxime U. Garcia
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448934b749
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Merge pull request #1613 from maxulysse/master_snpeff_vep_improved
update ensemblvep and snpeff modules
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2022-05-05 14:24:47 +02:00 |
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Carpanzano
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a700a9c15e
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Merge branch 'firstbranch' of github.com:carpanz/modules into firstbranch
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2022-05-05 13:52:45 +02:00 |
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Carpanzano
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9083d3bb3d
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integrating suggestions from PR comments, including recovery of tests for kronadb and more detailed explanation of input database in yml file
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2022-05-05 13:51:41 +02:00 |
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jasmezz
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47a95388c2
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Remove trailing whitespaces (ECLint check)
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2022-05-05 13:17:36 +02:00 |
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jasmezz
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24b9c397dd
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Apply suggestions from code review + add support for GFF annotations
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2022-05-05 13:14:39 +02:00 |
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MaxUlysse
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40dd662fd2
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update ensemblvep and snpeff modules
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2022-05-05 12:57:14 +02:00 |
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James A. Fellows Yates
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e60c6f9bfd
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Merge branch 'master' into firstbranch
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2022-05-05 10:57:27 +02:00 |
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Carpanzano
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204dfba2d8
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fixing ktupdatetaxonomy/meta.yml as suggested in PR
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2022-05-05 10:51:22 +02:00 |
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Mahesh Binzer-Panchal
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865ad3447a
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Update meta.yml output files
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2022-05-05 08:23:54 +00:00 |
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jasmezz
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6a7aec8b41
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Remove prokka test workflow
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2022-05-05 10:22:02 +02:00 |
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Mahesh Binzer-Panchal
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58ea709f7f
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Merge branch 'master' into busco
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2022-05-05 09:34:14 +02:00 |
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Lauri Mesilaakso
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6bb9be38c5
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Merge pull request #1606 from Genomic-Medicine-Linkoping/add_compression_to_bam2fq
update samtools/bam2fq: add compression for output fastq file
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2022-05-05 09:37:36 +03:00 |
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ljmesi
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888e122f05
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Merge branch 'add_compression_to_bam2fq' of https://github.com/Genomic-Medicine-Linkoping/modules into add_compression_to_bam2fq
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2022-05-05 08:32:48 +02:00 |
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ljmesi
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be8ce6de2a
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Remove variable md5sum from the tests
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2022-05-05 08:32:45 +02:00 |
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James A. Fellows Yates
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6393a085c5
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Apply suggestions from code review
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2022-05-05 08:23:51 +02:00 |
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JIANHONG OU
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29ee72c693
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update meta.yml and remove the cleanup step.
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2022-05-04 15:37:12 -04:00 |
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JIANHONG OU
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e9c82a5f48
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Update modules/motus/downloaddb/meta.yml
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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2022-05-04 15:29:06 -04:00 |
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James A. Fellows Yates
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35b5ba673f
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Merge branch 'master' into motus_downloaddb
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2022-05-04 20:58:08 +02:00 |
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James A. Fellows Yates
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ec5bada3fc
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Update modules/motus/downloaddb/meta.yml
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2022-05-04 20:55:16 +02:00 |
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Lauri Mesilaakso
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e757966566
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Merge branch 'master' into add_compression_to_bam2fq
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2022-05-04 18:41:36 +03:00 |
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Carpanzano
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a6086f549d
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recovered process name
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2022-05-04 17:28:24 +02:00 |
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Carpanzano
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38faf040ec
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missing change in ext.args config
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2022-05-04 16:54:15 +02:00 |
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Nicolas Vannieuwkerke
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3c07602443
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Added the version.yml
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2022-05-04 16:51:09 +02:00 |
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