4 commits

Author	SHA1	Message	Date
James A. Fellows Yates	561f16fe74	update: MALT build version bump (#699) ... * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Bump versions Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>	2021-09-15 16:46:29 +01:00
James A. Fellows Yates	26fc617983	Update: MALT_RUN (#706) ... * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Bump MALT versions for MALT-run Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>	2021-09-15 16:37:46 +01:00
James A. Fellows Yates	292e8eceb9	module: MALT/RUN (#646) ... * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Add MALT with incomplete tests * Parameter typo fix * Clean up test yaml * Finish MALT module prior UNZIP and MALT_BUILD modiules * Add required modules for tests * Sync test out with malt-build * Fix input parameters in tests based on final build module * Update modules/malt/run/meta.yml Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>	2021-08-04 11:06:08 +02:00
James A. Fellows Yates	6913da9d2d	module: MALT/BUILD (#645) ... * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Start MALT-build * Start MALT build (missing meta files and outputs specS) * Local tests * Correct test map_type * Finished module, just waiting for UNZIP module to finalise tests * Correct tests in preparation for Unzip * Ouptut log file too * Update meta.yml * Rename log file * Rename log file * Remove debugging stuff * Add Unzip module * Linting update * Linting update * Fix input db * Fix db file in cmd * Update modules/malt/build/main.nf * Update modules/malt/build/main.nf * Update main.nf	2021-08-03 16:24:19 +02:00