name: "bedtools_split" description: Split BED files into several smaller BED files keywords: - sort tools: - "bedtools": description: "A powerful toolset for genome arithmetic" documentation: "https://bedtools.readthedocs.io/en/latest/content/tools/sort.html" licence: "['MIT', 'GPL v2']" input: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - bed: type: file description: BED file pattern: "*.bed" - bed: type: value description: The number of files to split the BED into output: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - versions: type: file description: File containing software versions pattern: "versions.yml" - beds: type: file description: list of split BED files pattern: "*.bed" authors: - "@nvnieuwk"