- name: atlas call test_atlas_call
  command: nextflow run ./tests/modules/atlas/call -entry test_atlas_call -c ./tests/config/nextflow.config  -c ./tests/modules/atlas/call/nextflow.config
  tags:
    - atlas
    - atlas/call
  files:
    - path: output/atlas/test.paired_end.sorted_randomBase.vcf.gz
      contains:
        - "##source=atlas"