name: tabix_bgzip
description: Compresses files
keywords:
    - compress
    - bgzip
    - tabix
tools:
    - bgzip:
        description: |
          Bgzip compresses files in a similar manner to, and compatible with, gzip.
        homepage: https://www.htslib.org/doc/tabix.html
        documentation: http://www.htslib.org/doc/bgzip.html
        doi: 10.1093/bioinformatics/btp352
        licence: ['MIT']
input:
    - meta:
        type: map
        description: |
          Groovy Map containing sample information
          e.g. [ id:'test', single_end:false ]
    - file:
        type: file
        description: text file
output:
    - meta:
        type: map
        description: |
          Groovy Map containing sample information
          e.g. [ id:'test', single_end:false ]
    - file:
        type: file
        description: Output compressed file
        pattern: "*.{gz}"
    - versions:
        type: file
        description: File containing software versions
        pattern: "versions.yml"
authors:
    - "@joseespinosa"
    - "@drpatelh"
    - "@maxulysse"