- name: gatk4 selectvariants test_gatk4_selectvariants_vcf_input
  command: nextflow run tests/modules/gatk4/selectvariants -entry test_gatk4_selectvariants_vcf_input -c tests/config/nextflow.config
  tags:
    - gatk4/selectvariants
    - gatk4
  files:
    - path: output/gatk4/test.selectvariants.vcf.gz
    - path: output/gatk4/test.selectvariants.vcf.gz.tbi
    - path: output/gatk4/versions.yml

- name: gatk4 selectvariants test_gatk4_selectvariants_gz_input
  command: nextflow run tests/modules/gatk4/selectvariants -entry test_gatk4_selectvariants_gz_input -c tests/config/nextflow.config
  tags:
    - gatk4/selectvariants
    - gatk4
  files:
    - path: output/gatk4/test.selectvariants.vcf.gz
    - path: output/gatk4/test.selectvariants.vcf.gz.tbi
    - path: output/gatk4/versions.yml