- name: ultra pipeline test_ultra_pipeline
  command: nextflow run tests/modules/ultra/pipeline -entry test_ultra_pipeline -c tests/config/nextflow.config
  tags:
    - ultra
    - ultra/pipeline
  files:
    - path: output/gffread/genome_sorted.gtf
      md5sum: c0b034860c679a354cd093109ed90437
    - path: output/gunzip/test_hifi.fastq
      md5sum: 20e41c569d5828c1e87337e13a5185d3
    - path: output/ultra/test.sam
      md5sum: a37a1f9594a3099522dc1f6a903b2b12