process MD5SUM { tag "$meta.id" label 'process_low' conda (params.enable_conda ? "conda-forge::coreutils=8.25" : null) container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/coreutils:8.31--h14c3975_0' : 'quay.io/biocontainers/coreutils:8.31--h14c3975_0' }" input: tuple val(meta), path(file) output: tuple val(meta), path("*.md5"), emit: checksum path "versions.yml" , emit: versions when: task.ext.when == null || task.ext.when script: def args = task.ext.args ?: '' def prefix = task.ext.prefix ?: "${meta.id}" """ md5sum \\ $args \\ ${file} \\ > ${file}.md5 cat <<-END_VERSIONS > versions.yml "${task.process}": md5sum: \$(echo \$(md5sum --version 2>&1 | head -n 1| sed 's/^.*) //;' )) END_VERSIONS """ }