- name: scoary test_scoary
  command: nextflow run tests/modules/scoary -entry test_scoary -c tests/config/nextflow.config
  tags:
    - scoary
  files:
    - path: output/scoary/Bogus_trait.results.csv
      md5sum: 9550c692bbe6ff0ac844357bfabb809b
    - path: output/scoary/Tetracycline_resistance.results.csv
      md5sum: a87740818ab4de69a758fc75d7b879dd