- name: gatk4 applybqsr test_gatk4_applybqsr
  command: nextflow run tests/software/gatk4/applybqsr -entry test_gatk4_applybqsr -c tests/config/nextflow.config
  tags:
    - gatk4
    - gatk4_applybqsr
  files:
    - path: output/gatk4/test.bam
      md5sum: 943a43de5f575a0435fe13072cbc15c8

- name: "\e[3~"
  command: nextflow run tests/software/gatk4/applybqsr -entry test_gatk4_applybqsr_intervals -c tests/config/nextflow.config
  tags:
    - gatk4
    - gatk4_applybqsr_intervals
    - gatk4_applybqsr
  files:
    - path: output/gatk4/test.bam
      md5sum: a92238a9a78da48bf437fd5b7d9790a3