- name: delly call test_delly_call_bam
  command: nextflow run ./tests/modules/delly/call -entry test_delly_call_bam -c ./tests/config/nextflow.config  -c ./tests/modules/delly/call/nextflow.config
  tags:
    - delly
    - delly/call
  files:
    - path: output/delly/test.bcf
      md5sum: 82be17d3b18b80ef5f37627bb579b07b
    - path: output/delly/test.bcf.csi
      md5sum: c198abfc14584c5ac69c004057927e0b

- name: delly call test_delly_call_cram
  command: nextflow run ./tests/modules/delly/call -entry test_delly_call_cram -c ./tests/config/nextflow.config  -c ./tests/modules/delly/call/nextflow.config
  tags:
    - delly
    - delly/call
  files:
    - path: output/delly/test.bcf
      md5sum: 4f6ae6b5800ae824ba35674f2903cd5c
    - path: output/delly/test.bcf.csi
      md5sum: 19e0cdf06c415f4942f6d4dbd5fb7271

- name: delly call test_delly_call_exclude_regions
  command: nextflow run ./tests/modules/delly/call -entry test_delly_call_exclude_regions -c ./tests/config/nextflow.config  -c ./tests/modules/delly/call/nextflow.config
  tags:
    - delly
    - delly/call
  files:
    - path: output/delly/test.bcf
      md5sum: 4f6ae6b5800ae824ba35674f2903cd5c
    - path: output/delly/test.bcf.csi
      md5sum: 19e0cdf06c415f4942f6d4dbd5fb7271