name: qcat description: Demultiplexer for Nanopore samples keywords: - demultiplex tools: - qcat: description: | A demultiplexer for Nanopore samples homepage: https://github.com/nanoporetech/qcat documentation: https://github.com/nanoporetech/qcat#qcat licence: ["MPL-2.0"] input: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - reads: type: file description: | Non-demultiplexed fastq files output: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - reads: type: file description: Demultiplexed fastq samples pattern: "*.fastq.gz" - versions: type: file description: File containing software versions pattern: "versions.yml" authors: - "@yuukiiwa" - "@drpatelh"