- name: snapaligner align test_snapaligner_single
  command: nextflow run tests/modules/snapaligner/align -entry test_snapaligner_single -c tests/config/nextflow.config
  tags:
    - snapaligner/single
    - snapaligner
  files:
    - path: output/snapaligner/test.bam
      md5sum: 5d95594e4ef1ee23ce56e6a7cb64f0f2
    - path: output/snapaligner/versions.yml

- name: snapaligner align test_snapaligner_paired
  command: nextflow run tests/modules/snapaligner/align -entry test_snapaligner_paired -c tests/config/nextflow.config
  tags:
    - snapaligner/paired
    - snapaligner
  files:
    - path: output/snapaligner/test.bam
      md5sum: a1405da5876f15dbe8a81516b94c2a15
    - path: output/snapaligner/versions.yml