name: tabix_bgzip description: Compresses/decompresses files keywords: - compress - decompress - bgzip - tabix tools: - bgzip: description: | Bgzip compresses or decompresses files in a similar manner to, and compatible with, gzip. homepage: https://www.htslib.org/doc/tabix.html documentation: http://www.htslib.org/doc/bgzip.html doi: 10.1093/bioinformatics/btp352 licence: ["MIT"] input: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - input: type: file description: file to compress or to decompress output: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - output: type: file description: Output compressed/decompressed file pattern: "*." - versions: type: file description: File containing software versions pattern: "versions.yml" authors: - "@joseespinosa" - "@drpatelh" - "@maxulysse"