subworkflows/align_bowtie2:
  - subworkflows/nf-core/align_bowtie2/**
  - tests/subworkflows/nf-core/align_bowtie2/**

subworkflows/bam_stats_samtools:
  - subworkflows/nf-core/bam_stats_samtools/**
  - tests/subworkflows/nf-core/bam_stats_samtools/**

subworkflows/bam_sort_samtools:
  - subworkflows/nf-core/bam_sort_samtools/**
  - tests/subworkflows/nf-core/bam_sort_samtools/**

subworkflows/sra_fastq:
  - subworkflows/nf-core/sra_fastq/**
  - tests/subworkflows/nf-core/sra_fastq/**