- name: samtools fastq test_samtools_collatefastq
  command: nextflow run ./tests/modules/samtools/collatefastq -entry test_samtools_collatefastq -c ./tests/config/nextflow.config -c ./tests/modules/samtools/collatefastq/nextflow.config
  tags:
    - samtools
    - samtools/collatefastq
  files:
    - path: output/samtools/test_1.fq.gz
      md5sum: 829732de4e937edca90f27b07e5b501a
    - path: output/samtools/test_2.fq.gz
      md5sum: ef27d3809e495620fd93df894280c03a
    - path: output/samtools/test_other.fq.gz
      md5sum: 709872fc2910431b1e8b7074bfe38c67
    - path: output/samtools/test_singleton.fq.gz
      md5sum: 709872fc2910431b1e8b7074bfe38c67