#!/usr/bin/env nextflow

nextflow.enable.dsl = 2

include { PYDAMAGE_ANALYZE } from '../../../../modules/pydamage/analyze/main.nf'

workflow test_pydamage {

    input = [ [ id:'test', single_end:false ], // meta map
              file(params.test_data['homo_sapiens']['illumina']['test_paired_end_sorted_bam'], checkIfExists: true),
              file(params.test_data['homo_sapiens']['illumina']['test_paired_end_sorted_bam_bai'], checkIfExists: true) ]

    PYDAMAGE_ANALYZE ( input )
}