- name: seqsero2 test_seqsero2
  command: nextflow run tests/modules/seqsero2 -entry test_seqsero2 -c tests/config/nextflow.config
  tags:
    - seqsero2
  files:
    - path: output/seqsero2/results/SeqSero_log.txt
      md5sum: d00242dfa734b5abb3622a6048f0b4fb
    - path: output/seqsero2/results/SeqSero_result.tsv
      contains: ['Sample', 'Predicted', 'Note']
    - path: output/seqsero2/results/SeqSero_result.txt
      contains: ['Sample', 'Predicted', 'Note']