#!/usr/bin/env nextflow

nextflow.enable.dsl = 2

include { FGBIO_GROUPREADSBYUMI } from '../../../../modules/fgbio/groupreadsbyumi/main.nf' addParams( options: [:] )

workflow test_fgbio_groupreadsbyumi {

    input = [ [ id:'test', single_end:false ], // meta map
              file(params.test_data['homo_sapiens']['illumina']['test_paired_end_umi_unsorted_tagged_bam'], checkIfExists: true) ]

    strategy = "Adjacency"

    FGBIO_GROUPREADSBYUMI ( input, strategy )
}