#!/usr/bin/env nextflow

nextflow.enable.dsl = 2

include { HIFIASM } from '../../../software/hifiasm/main.nf' addParams( options: [:] )

/* 
 * Test with single-end data
 */
/* workflow test_fastqc_single_end {

    def input = []
    input = [ [ id:'test', single_end:true ], // meta map
              [ file("${launchDir}/tests/data/genomics/sarscov2/fastq/test_1.fastq.gz", checkIfExists: true) ] ]
    FASTQC ( input )
} */

/*
 * Test version printing
 */
workflow test_hifiasm_version {

/*     def input = []
    input = [[id: 'test', single_end: false], // meta map
             [file("${launchDir}/tests/data/genomics/sarscov2/fastq/test_1.fastq.gz", checkIfExists: true),
              file("${launchDir}/tests/data/genomics/sarscov2/fastq/test_2.fastq.gz", checkIfExists: true)]] */
    HIFIASM ()
}