- name: motus merge test_motus_merge
  command: nextflow run ./tests/modules/motus/merge -entry test_motus_merge -c ./tests/config/nextflow.config  -c ./tests/modules/motus/merge/nextflow.config
  tags:
    - motus
    - motus/merge
  files:
    - path: output/motus/test.txt
      contains:
        - "consensus_taxonomy"

- name: motus merge test_motus_merge_biom
  command: nextflow run ./tests/modules/motus/merge -entry test_motus_merge_biom -c ./tests/config/nextflow.config  -c ./tests/modules/motus/merge/nextflow.config
  tags:
    - motus
    - motus/merge
  files:
    - path: output/motus/test.biom
      contains:
        - "Biological Observation Matrix 1.0.0"