process UNZIP { tag "$archive" label 'process_low' conda (params.enable_conda ? "bioconda::p7zip=15.09" : null) container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/p7zip:15.09--h2d50403_4' : 'quay.io/biocontainers/p7zip:15.09--h2d50403_4' }" input: path archive output: path "${archive.baseName}/", emit: unzipped_archive path "versions.yml" , emit: versions script: def args = task.ext.args ?: '' if ( archive instanceof List && archive.name.size > 1 ) { exit 1, "[UNZIP] error: 7za only accepts a single archive as input. Please check module input." } """ 7za \\ e \\ -o"${archive.baseName}"/ \\ $args \\ $archive cat <<-END_VERSIONS > versions.yml "${task.process}": 7za: \$(echo \$(7za --help) | sed 's/.*p7zip Version //; s/(.*//') END_VERSIONS """ }