name: graphmap2_index description: A versatile pairwise aligner for genomic and spliced nucleotide sequences keywords: - index - fasta - reference tools: - graphmap2: description: | A versatile pairwise aligner for genomic and spliced nucleotide sequences. homepage: https://github.com/lbcb-sci/graphmap2 documentation: https://github.com/lbcb-sci/graphmap2#graphmap2---a-highly-sensitive-and-accurate-mapper-for-long-error-prone-reads licence: ["MIT"] input: - fasta: type: file description: | Reference database in FASTA format. output: - gmidx: type: file description: Graphmap2 fasta index in gmidx format pattern: "*.gmidx" - versions: type: file description: File containing software versions pattern: "versions.yml" authors: - "@yuukiiwa" - "@drpatelh"