name: t-coffee
description: Run tcofee multiple sequence alignment
keywords:
    - MSA
    - sequence aligment
tools:
    - t-coffee:
        description: |
            T-Coffee is a multiple sequence alignment package.
            It uses a progressive approach and a consistency objective
            function for alignment evaluation.
        homepage: http://www.tcoffee.org/
        documentation: http://www.tcoffee.org/Projects/tcoffee/index.html#DOCUMENTATION
input:
    -
        - fasta:
            type: path
            description: Input fasta file
            pattern: *.{fasta,fa,tfa}
output:
    -
        - alignment:
            type: file
            description: tcoffee alignment file
            pattern: *.aln

authors:
    - @JoseEspinosa