name: MultiQC description: Aggregate results from bioinformatics analyses across many samples into a single report keywords: - QC - bioinformatics tools - Beautiful stand-alone HTML report tools: - multiqc: description: | MultiQC searches a given directory for analysis logs and compiles a HTML report. It's a general use tool, perfect for summarising the output from numerous bioinformatics tools. homepage: https://multiqc.info/ documentation: https://multiqc.info/docs/ licence: ['GPL-3.0-or-later'] input: - multiqc_files: type: file description: | List of reports / files recognised by MultiQC, for example the html and zip output of FastQC output: - report: type: file description: MultiQC report file pattern: "multiqc_report.html" - data: type: dir description: MultiQC data dir pattern: "multiqc_data" - plots: type: file description: Plots created by MultiQC pattern: "*_data" - versions: type: file description: File containing software versions pattern: "versions.yml" authors: - "@abhi18av" - "@bunop" - "@drpatelh"