- name: fastp single-end
  command: nextflow run ./tests/software/fastp -entry test_fastp_single_end -c ./tests/config/nextflow.config
  tags:
    - fastp
    - fastp_single_end
  files:
    - path: ./output/fastp/test.fastp.html
    - path: ./output/fastp/test.fastp.log
    - path: ./output/fastp/test.trim.fastq.gz
      md5sum: e2257263668dc8a75d95475099fb472d
    - path: ./output/fastp/test.fastp.json

- name: fastp paired-end
  command: nextflow run ./tests/software/fastp -entry test_fastp_paired_end -c ./tests/config/nextflow.config
  tags:
    - fastp
    - fastp_paired_end
  files:
    - path: ./output/fastp/test.fastp.html
    - path: ./output/fastp/test.fastp.log
    - path: ./output/fastp/test.fastp.json
    - path: ./output/fastp/test_1.trim.fastq.gz
      md5sum: e2257263668dc8a75d95475099fb472d
    - path: ./output/fastp/test_2.trim.fastq.gz
      md5sum: 9eff7203596580cc5e42aceab4a469df