- name: isoseq3 cluster test_isoseq3_cluster
  command: nextflow run ./tests/modules/isoseq3/cluster -entry test_isoseq3_cluster -c ./tests/config/nextflow.config -c ./tests/modules/isoseq3/cluster/nextflow.config
  tags:
    - isoseq3
    - isoseq3/cluster
  files:
    - path: output/isoseq3/test.transcripts.bam
      md5sum: eb36697688099c757ef4196f54ad7d7a
    - path: output/isoseq3/test.transcripts.bam.pbi
      md5sum: db70cee03421822e9b8f9fb6b228f461
    - path: output/isoseq3/test.transcripts.cluster
      md5sum: d5059d856763fc5591332980bfc0d57b
    - path: output/isoseq3/test.transcripts.cluster_report.csv
      md5sum: 342d97dc10aedf80a45977edcb491c62
    - path: output/isoseq3/test.transcripts.hq.bam
      md5sum: 4c5f4ffb429107c9c9578419e07d6987
    - path: output/isoseq3/test.transcripts.hq.bam.pbi
      md5sum: 39ac3e957c8d55b0ce3f425d63baa154
    - path: output/isoseq3/test.transcripts.lq.bam
      md5sum: 710ca4bc58ac039d76775460e1c822a0
    - path: output/isoseq3/test.transcripts.lq.bam.pbi
      md5sum: 9b32036553bf3dced3065e6d0f36aef9
    - path: output/isoseq3/test.transcripts.singletons.bam
      md5sum: 0288577406b9d1e7356de9b4d7c2bb7c
    - path: output/isoseq3/test.transcripts.singletons.bam.pbi
      md5sum: 8e0e0681179c0c36209b49fa60783841
    - path: output/isoseq3/test.transcripts.transcriptset.xml
      contains: ["PacBio.DataSet.TranscriptSet"]