- name: bwa index
  command: nextflow run ./tests/software/bwa/index -entry test_bwa_index -c tests/config/nextflow.config
  tags:
    - bwa
    - bwa_index
  files:
    - path: ./output/index/bwa/genome.bwt
      md5sum: 0469c30a1e239dd08f68afe66fde99da
    - path: ./output/index/bwa/genome.amb
      md5sum: 3a68b8b2287e07dd3f5f95f4344ba76e
    - path: ./output/index/bwa/genome.sa
      md5sum: ab3952cabf026b48cd3eb5bccbb636d1
    - path: ./output/index/bwa/genome.pac
      md5sum: 983e3d2cd6f36e2546e6d25a0da78d66
    - path: ./output/index/bwa/genome.ann
      md5sum: c32e11f6c859f166c7525a9c1d583567