- name: tiddit sv
  command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv -c tests/config/nextflow.config
  tags:
    - tiddit
    - tiddit_sv
    - vcf
  files:
    - path: output/tiddit/test.ploidy.tab
      md5sum: 45e050b0e204f0a5a3a99627cc440eaa
    - path: output/tiddit/test.signals.tab
      md5sum: 25408a43dbdd01c08e33a6d670f2bb84
    - path: output/tiddit/test.vcf
      should_exist: true

- name: tiddit sv no ref
  command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv_no_ref -c tests/config/nextflow.config
  tags:
    - tiddit
    - tiddit_sv
    - vcf
  files:
    - path: output/tiddit/test.ploidy.tab
      md5sum: 45e050b0e204f0a5a3a99627cc440eaa
    - path: output/tiddit/test.signals.tab
      md5sum: 25408a43dbdd01c08e33a6d670f2bb84
    - path: output/tiddit/test.vcf
      should_exist: true