name: prodigal
## TODO nf-core: Add a description of the module and list keywords
description: write your description here
keywords:
  - sort
tools:
  - prodigal:
      ## TODO nf-core: Add a description and other details for the software below
      description: Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program
      homepage: {}
      documentation: {}
      tool_dev_url: {}
      doi: ""
      licence: ['GPL v3']

## TODO nf-core: Add a description of all of the variables used as input
input:
  - meta:
      type: map
      description: |
        Groovy Map containing sample information
        e.g. [ id:'test', single_end:false ]
  ## TODO nf-core: Delete / customise this example input
  - bam:
      type: file
      description: BAM/CRAM/SAM file
      pattern: "*.{bam,cram,sam}"

## TODO nf-core: Add a description of all of the variables used as output
output:
  - meta:
      type: map
      description: |
        Groovy Map containing sample information
        e.g. [ id:'test', single_end:false ]
  - version:
      type: file
      description: File containing software version
      pattern: "*.{version.txt}"
  ## TODO nf-core: Delete / customise this example output
  - bam:
      type: file
      description: Sorted BAM/CRAM/SAM file
      pattern: "*.{bam,cram,sam}"

authors:
  - "@grst"