- name: bcl2fastq test_bcl2fastq
  command: nextflow run ./tests/modules/bcl2fastq -entry test_bcl2fastq -c ./tests/config/nextflow.config  -c ./tests/modules/bcl2fastq/nextflow.config
  tags:
    - bcl2fastq
  files:
    - path: output/bcl2fastq/Sample1_S1_L001_R1_001.fastq.gz
      md5sum: e92fce7b86c6447b053d72c5cb4be89c
    - path: output/bcl2fastq/Stats/AdapterTrimming.txt
      md5sum: 48ed2b914b1246c0b5d8667525550946
    - path: output/bcl2fastq/Stats/ConversionStats.xml
      md5sum: 8fe0f57f3f5d256a0762dba75ac62d05
    - path: output/bcl2fastq/Stats/DemultiplexingStats.xml
      md5sum: 2047ff18f5b9107c084de06e9ff943ad
    - path: output/bcl2fastq/Stats/DemuxSummaryF1L1.txt
      md5sum: 03e5fd0c1e3079c5f8c7b4d0501b37ff
    - path: output/bcl2fastq/Stats/FastqSummaryF1L1.txt
      md5sum: 0c6f2d87ee183b84d1051cde9a5643d1
    - path: output/bcl2fastq/Stats/Stats.json
      md5sum: 8e5f038b8aa9e465599d3575f930e604
    - path: output/bcl2fastq/flowcell/InterOp/ControlMetricsOut.bin
      md5sum: 6d77b38d0793a6e1ce1e85706e488953
    - path: output/bcl2fastq/flowcell/InterOp/CorrectedIntMetricsOut.bin
      md5sum: 2bbf84d3be72734addaa2fe794711434
    - path: output/bcl2fastq/flowcell/InterOp/ErrorMetricsOut.bin
      md5sum: 38c88def138e9bb832539911affdb286
    - path: output/bcl2fastq/flowcell/InterOp/ExtractionMetricsOut.bin
      md5sum: 7497c3178837eea8f09350b5cd252e99
    - path: output/bcl2fastq/flowcell/InterOp/IndexMetricsOut.bin
      md5sum: 9e688c58a5487b8eaf69c9e1005ad0bf
    - path: output/bcl2fastq/flowcell/InterOp/QMetricsOut.bin
      md5sum: 7e9f198d53ebdfbb699a5f94cf1ed51c
    - path: output/bcl2fastq/flowcell/InterOp/TileMetricsOut.bin
      md5sum: 83891751ec1c91a425a524b476b6ca3c