name: last_lastdb description: Prepare sequences for subsequent alignment with lastal. keywords: - LAST - index - fasta - fastq tools: - last: description: LAST finds & aligns related regions of sequences. homepage: https://gitlab.com/mcfrith/last documentation: https://gitlab.com/mcfrith/last/-/blob/main/doc/lastdb.rst tool_dev_url: https://gitlab.com/mcfrith/last doi: "" licence: ["GPL-3.0-or-later"] input: - meta: type: map description: | Groovy Map containing sample information e.g. [ id:'test', single_end:false ] - fastx: type: file description: > Sequence file in FASTA or FASTQ format. May be compressed with gzip. pattern: "*.{fasta,fasta.gz,fastq,fastq.gz}" output: - versions: type: file description: File containing software versions pattern: "versions.yml" - index: type: directory description: directory containing the files of the LAST index pattern: "lastdb/" authors: - "@charles-plessy"