name: samtools_faidx
description: Index FASTA file
keywords:
    - index
    - fasta
tools:
    - samtools:
        description: |
            SAMtools is a set of utilities for interacting with and post-processing
            short DNA sequence read alignments in the SAM, BAM and CRAM formats, written by Heng Li.
            These files are generated as output by short read aligners like BWA.
        homepage: http://www.htslib.org/
        documentation: http://www.htslib.org/doc/samtools.html
        doi: 10.1093/bioinformatics/btp352
input:
    - fasta:
        type: file
        description: FASTA file
        pattern: "*.{fa,fasta}"
output:
    - fai:
        type: file
        description: FASTA index file
        pattern: "*.{fai}"
    - version:
        type: file
        description: File containing software version
        pattern: "*.{version.txt}"
authors:
    - "@drpatelh"
    - "@ewels"
    - "@phue"